Skyline Targeted Proteomics Environment 
Targeted Proteomics CourseRegister NOW for the Targeted Proteomics Course
at Northeastern University in Boston this spring
Skyline WebinarsReview the latest Skyline Tutorial Webinar
Isotope Labeled Standards in Skyline

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Join Us

Spring Computation & Statistics for Targeted Proteomics Course at Northeastern University Boston, MA (May 2-6, 2016) - Register now!

Summer Targeted Proteomics Course at University of Washington Seattle WA (July 18-22, 2016)

Fall Targeted Proteomics Course at PRBB, Barcelona (November 14-18, 2016)


Winter Targeted Proteomics Course at ETH, Zurich (February 8-12, 2016)

Spring Targeted Proteomics Course at Buck Institute in the north San Francisco Bay area, CA. (March 7th - 11th, 2016)


Winter Targeted Proteomics Course at IIT-Bombay, Mumbai (December 10-14, 2015)

Fall EMBO Practical Course: Targeted Proteomics at PRBB, Barcelona (November 15-20, 2015)

Summer Targeted Proteomics Workshop at Fiocruz, Brazil (August 31 - September 2, 2015)

Summer Targeted Proteomics Course at ETH, Zurich (June 22-26, 2015) - watch the videos

Summer Skyline User Group Meeting at ASMS 2015, St. Louis, MO (May 31, 2015)- review the slides

Summer ASMS Short Course [description] at ASMS 2015, St. Louis, MO (May 30 & 31, 2015)

Spring Computation and Statistics for Discovery and Targeted Proteomics at Northeastern, Boston (May 18-22, 2015)

Spring Targeted Quantitative Proteomics Course at UW, Seattle (March 23-27, 2015)

Spring Short Course at US HUPO, Tempe (March 15, 2015) - review the slides

More Events

Review the slides
Skyline User Group Meeting

Recently Published

Egertson, Nature Protocols - Multiplexed peptide analysis using data-independent acquisition and Skyline

Abbatiello, Mollecular Cellular Proteomics - Large-scale inter-laboratory study to develop, analytically validate and apply highly multiplexed, quantitative peptide assays to measure cancer-relevant proteins in plasma

Sharma, Journal of Proteome Research - Panorama: A Targeted Proteomics Knowledge Base

Broudy, Killeen, Bioinformatics - A framework for installable external tools in Skyline

More Publications


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Get Involved

Make a tax-deductible contribution to the Skyline project this year through the University of Washington Foundation

See what the community is saying about Skyline - and add your statement!

Other ways you can help


Skyline adoption and use information

Create a new project for your lab or group on PanoramaWeb hosted by the University of Washington

Skyline source code is available under Apache 2.0 License and part of the ProteoWizard project (mzML and mzXML conversion)

Spectral Library Links