Skyline Targeted Proteomics Environment 
Skyline User Group MeetingReview the slides from the Skyline User Group Meeting at ASMS Skyline WebinarsReview the latest Skyline Tutorial Webinar
PRM for PTM Studies with Skyline

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Winter Targeted Proteomics Course at IIT-Bombay, Mumbai (December 10-14, 2015)

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Fall EMBO Practical Course: Targeted Proteomics at PRBB, Barcelona (November 15-20, 2015)

Past

Summer Targeted Proteomics Course at ETH, Zurich (June 22-26, 2015) - watch the videos

Summer Skyline User Group Meeting at ASMS 2015, St. Louis, MO (May 31, 2015)

Summer ASMS Short Course [description] at ASMS 2015, St. Louis, MO (May 30 & 31, 2015)

Spring Computation and Statistics for Discovery and Targeted Proteomics at Northeastern, Boston (May 18-22, 2015)

Spring Targeted Quantitative Proteomics Course at UW, Seattle (March 23-27, 2015)

Spring Short Course at US HUPO, Tempe (March 15, 2015) - review the slides

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Skyline User Group Meeting
2015

Recently Published

Egertson, Nature Protocols - Multiplexed peptide analysis using data-independent acquisition and Skyline
[abstract]

Abbatiello, Mollecular Cellular Proteomics - Large-scale inter-laboratory study to develop, analytically validate and apply highly multiplexed, quantitative peptide assays to measure cancer-relevant proteins in plasma
[abstract]

Sharma, Journal of Proteome Research - Panorama: A Targeted Proteomics Knowledge Base
[abstract]

Broudy, Killeen, Bioinformatics - A framework for installable external tools in Skyline
[abstract]

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Related

Dashboard
Skyline adoption and use information

Panorama
Create a new project for your lab or group on PanoramaWeb hosted by the University of Washington

ProteoWizard
Skyline source code is available under Apache 2.0 License and part of the ProteoWizard project (mzML and mzXML conversion)

Spectral Library Links
PeptideAtlas
NIST
GPM