Skyline Targeted Proteomics Environment 
Skyline User Group MeetingRegister now to reserve your seat at the Skyline User Group Meeting at ASMS
San Antonio, TX - Sunday, June 5th
Skyline WebinarsWatch the latest Skyline Tutorial Webinar on video
Calibrated Quantification with Skyline

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Summer Skyline User Group Meeting at ASMS, San Antonio, TX (June 5, 2016) Register now!

Summer European Summer School on: Advanced Proteomics in Bressanone/Brixen, Italy (July 31 - August 6, 2016)

Fall Targeted Proteomics Course at PRBB, Barcelona (November 14-18, 2016)


Summer Targeted Proteomics Course at University of Washington Seattle WA (July 18-22, 2016)


Spring Computation & Statistics for Targeted Proteomics Course at Northeastern University Boston, MA (May 2-6, 2016)

Spring Targeted Proteomics and Statistics workshop at US HUPO, Boston, MA (March 13, 2016)

Spring Targeted Proteomics Course at Buck Institute in the north San Francisco Bay area, CA. (March 7th - 11th, 2016)

Winter Targeted Proteomics Course at ETH, Zurich (February 8-12, 2016) - watch the videos

Winter Targeted Proteomics Course at IIT-Bombay, Mumbai (December 10-14, 2015)

Fall EMBO Practical Course: Targeted Proteomics at PRBB, Barcelona (November 15-20, 2015)

Summer Targeted Proteomics Workshop at Fiocruz, Brazil (August 31 - September 2, 2015)

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Skyline User Group Meeting

Recently Published

Egertson, Nature Protocols - Multiplexed peptide analysis using data-independent acquisition and Skyline

Abbatiello, Mollecular Cellular Proteomics - Large-scale inter-laboratory study to develop, analytically validate and apply highly multiplexed, quantitative peptide assays to measure cancer-relevant proteins in plasma

Sharma, Journal of Proteome Research - Panorama: A Targeted Proteomics Knowledge Base

Broudy, Killeen, Bioinformatics - A framework for installable external tools in Skyline

More Publications


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Make a tax-deductible contribution to the Skyline project this year through the University of Washington Foundation

See what the community is saying about Skyline - and add your statement!

Other ways you can help


Skyline adoption and use information

Create a new project for your lab or group on PanoramaWeb hosted by the University of Washington

Skyline source code is available under Apache 2.0 License and part of the ProteoWizard project (mzML and mzXML conversion)

Spectral Library Links